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Microarray Analysis for Human Genetic Disease - Article


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Infantile-onset ascending hereditary spastic paralysis

IAHSP; spastic paralysis, infantile onset ascending


Clinical Trial: Microarray Analysis for Human Genetic Disease

This study is currently recruiting patients.

Sponsored by: National Human Genome Research Institute (NHGRI)
Information provided by: Warren G Magnuson Clinical Center (CC)

Purpose

This study will look at genetic influences in the development of male and female breast cancer and ovarian cancer that run in families. It will use a new technology called cDNA microarray hybridization that looks at a wide array of genes to identify disease-associated patterns in the human genome (complete set of human genes). Numerous studies have linked particular genes to a given disease, but there is very little information on patterns of gene expression (production of proteins from genetic coding) in the entire human genome.

Pinpointing genetic abnormalities in disease may help identify individuals at increased risk and perhaps lead to new avenues of treatment or prevention. A primary goal of this study will be to create a database of gene expression for human cancers and other disorders that will provide the basis for finding genetic abnormalities in disease.

Tumors specimens used in this study will be taken from tissues biopsied from patients with breast or ovarian cancer or melanoma as part of their routine care. Patients in the study will be among those receiving care at the: Department of Oncology, University Hospital, University of Lund, Sweden (breast cancer); Department of Medicine, University of Michigan, Ann Arbor, Michigan (breast cancer); Surgery Branch, National Cancer Institute, Bethesda, Maryland (melanoma).

Patients in the study will have a family history taken and will complete a questionnaire. Some patients will be asked to have a blood test. Breast cancer patients will have a mammogram if one has not been done within the last year.

Condition
Breast Neoplasm
Hereditary Neoplastic Syndrome
Melanoma
Ovarian Neoplasm

MedlinePlus related topics:  Breast Cancer;   Cancer;   Cancer Alternative Therapy;   Genetic Disorders;   Melanoma;   Ovarian Cancer
Genetics Home Reference related topics:  breast cancer

Study Type: Observational
Study Design: Natural History

Further Study Details: 

Expected Total Enrollment:  1500

Study start: June 29, 1999

The purpose of our study is to make use of a novel technology that the Cancer Genetics Branch of the NHGRI has been a leader in developing. This technology for genome-wide expression analysis, cDNA microarray hybridization, is the focus of our protocol. We will access tissue banks collected by our collaborators which contain excess tissues obtained during routine clinical care. Specimens will be processed for large scale gene expression analysis using cDNA microarrays. The development of this gene expression database is the primary purpose of this study. Currently available and new bioinformatics tools will be applied to the data for the characterization of disease subsets (e.g., early vs. advanced stage cancer) as well as to mine the data for specific genes which are linked to given disease states.

Eligibility

Genders Eligible for Study:  Both

Criteria

Clinical inclusion/exclusion criteria will be dependent upon the collaborating Institutions' requirements.

Location and Contact Information


Maryland
      National Human Genome Research Institute (NHGRI), 9000 Rockville Pike,  Bethesda,  Maryland,  20892,  United States; Recruiting
Patient Recruitment and Public Liaison Office  1-800-411-1222    prpl@mail.cc.nih.gov 
TTY  1-866-411-1010 

More Information

Detailed Web Page

Publications

Khan J, Simon R, Bittner M, Chen Y, Leighton SB, Pohida T, Smith PD, Jiang Y, Gooden GC, Trent JM, Meltzer PS. Gene expression profiling of alveolar rhabdomyosarcoma with cDNA microarrays. Cancer Res. 1998 Nov 15;58(22):5009-13.

Duggan DJ, Bittner M, Chen Y, Meltzer P, Trent JM. Expression profiling using cDNA microarrays. Nat Genet. 1999 Jan;21(1 Suppl):10-4. Review.

Ermolaeva O, Rastogi M, Pruitt KD, Schuler GD, Bittner ML, Chen Y, Simon R, Meltzer P, Trent JM, Boguski MS. Data management and analysis for gene expression arrays. Nat Genet. 1998 Sep;20(1):19-23.

Study ID Numbers:  990130; 99-HG-0130
Record last reviewed:  May 17, 2004
Last Updated:  November 23, 2004
Record first received:  November 3, 1999
ClinicalTrials.gov Identifier:  NCT00001898
Health Authority: United States: Federal Government
ClinicalTrials.gov processed this record on 2005-04-08


Source: ClinicalTrials.gov
Cache Date: April 9, 2005


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August 28, 2008



Page Updated: September 6, 2005
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